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Cluster: HRGMv2_1499_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1499_36 HRGMv2_1499_36_3 2860 4365 + GH77
CAZyme HRGMv2_1499_36 HRGMv2_1499_36_4 4494 6761 + GT35
TC HRGMv2_1499_36 HRGMv2_1499_36_5 7217 8416 - 3.A.1.1.22
TC HRGMv2_1499_36 HRGMv2_1499_36_6 8485 9324 - 3.A.1.1.45
TC HRGMv2_1499_36 HRGMv2_1499_36_7 9324 10178 - 3.A.1.1.45
TC HRGMv2_1499_36 HRGMv2_1499_36_8 10266 11582 - 3.A.1.1.45
TF HRGMv2_1499_36 HRGMv2_1499_36_9 11889 12608 - GntR
NULL(UNKNOWN) HRGMv2_1499_36 HRGMv2_1499_36_10 12692 12811 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1499_36 HRGMv2_1499_36_11 12833 15283 + 4.A.1.1.8
Gene ID: HRGMv2_1499_36_3
Type: CAZyme
Location: 2860 - 4365 (+)
Gene ID: HRGMv2_1499_36_4
Type: CAZyme
Location: 4494 - 6761 (+)
Gene ID: HRGMv2_1499_36_5
Type: TC
Location: 7217 - 8416 (-)
Gene ID: HRGMv2_1499_36_6
Type: TC
Location: 8485 - 9324 (-)
Gene ID: HRGMv2_1499_36_7
Type: TC
Location: 9324 - 10178 (-)
Gene ID: HRGMv2_1499_36_8
Type: TC
Location: 10266 - 11582 (-)
Gene ID: HRGMv2_1499_36_9
Type: TF
Location: 11889 - 12608 (-)
Gene ID: HRGMv2_1499_36_10
Type:
Location: 12692 - 12811 (-)
Gene ID: HRGMv2_1499_36_11
Type: TC
Location: 12833 - 15283 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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