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Cluster: HRGMv2_1496_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1496_4 HRGMv2_1496_4_88 97530 99221 + 4.A.3.1.1
CAZyme HRGMv2_1496_4 HRGMv2_1496_4_89 100134 101555 - GH1
TC HRGMv2_1496_4 HRGMv2_1496_4_90 101631 103409 - 4.A.3.1.1
TF HRGMv2_1496_4 HRGMv2_1496_4_91 103685 104695 + LacI
CAZyme HRGMv2_1496_4 HRGMv2_1496_4_92 105110 106549 - GH1
TC HRGMv2_1496_4 HRGMv2_1496_4_93 106746 108521 - 4.A.3.1.1
TF HRGMv2_1496_4 HRGMv2_1496_4_94 108878 109882 + LacI
TC HRGMv2_1496_4 HRGMv2_1496_4_95 110097 110435 + 4.A.3.1.2
Gene ID: HRGMv2_1496_4_88
Type: TC
Location: 97530 - 99221 (+)
Gene ID: HRGMv2_1496_4_89
Type: CAZyme
Location: 100134 - 101555 (-)
Gene ID: HRGMv2_1496_4_90
Type: TC
Location: 101631 - 103409 (-)
Gene ID: HRGMv2_1496_4_91
Type: TF
Location: 103685 - 104695 (+)
Gene ID: HRGMv2_1496_4_92
Type: CAZyme
Location: 105110 - 106549 (-)
Gene ID: HRGMv2_1496_4_93
Type: TC
Location: 106746 - 108521 (-)
Gene ID: HRGMv2_1496_4_94
Type: TF
Location: 108878 - 109882 (+)
Gene ID: HRGMv2_1496_4_95
Type: TC
Location: 110097 - 110435 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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