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Cluster: HRGMv2_1496_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1496_27 HRGMv2_1496_27_14 15390 17843 - 4.A.1.1.8
TF HRGMv2_1496_27 HRGMv2_1496_27_15 18068 18787 + GntR
TC HRGMv2_1496_27 HRGMv2_1496_27_16 19094 20410 + 3.A.1.1.45
TC HRGMv2_1496_27 HRGMv2_1496_27_17 20498 21352 + 3.A.1.1.45
TC HRGMv2_1496_27 HRGMv2_1496_27_18 21352 22191 + 3.A.1.1.45
TC HRGMv2_1496_27 HRGMv2_1496_27_19 22260 23459 + 3.A.1.1.22
CAZyme HRGMv2_1496_27 HRGMv2_1496_27_20 23994 26261 - GT35
CAZyme HRGMv2_1496_27 HRGMv2_1496_27_21 26390 27895 - GH77
Gene ID: HRGMv2_1496_27_14
Type: TC
Location: 15390 - 17843 (-)
Gene ID: HRGMv2_1496_27_15
Type: TF
Location: 18068 - 18787 (+)
Gene ID: HRGMv2_1496_27_16
Type: TC
Location: 19094 - 20410 (+)
Gene ID: HRGMv2_1496_27_17
Type: TC
Location: 20498 - 21352 (+)
Gene ID: HRGMv2_1496_27_18
Type: TC
Location: 21352 - 22191 (+)
Gene ID: HRGMv2_1496_27_19
Type: TC
Location: 22260 - 23459 (+)
Gene ID: HRGMv2_1496_27_20
Type: CAZyme
Location: 23994 - 26261 (-)
Gene ID: HRGMv2_1496_27_21
Type: CAZyme
Location: 26390 - 27895 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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