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Cluster: HRGMv2_1496_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1496_22 HRGMv2_1496_22_6 6755 7585 - 3.A.1.132.3
pfam HRGMv2_1496_22 HRGMv2_1496_22_7 7845 10724 + UvrA_DNA-bind | UvrA_inter
pfam HRGMv2_1496_22 HRGMv2_1496_22_8 10858 11358 + tRNA_edit
TC HRGMv2_1496_22 HRGMv2_1496_22_9 11362 13647 + 2.A.66.4.4
pfam HRGMv2_1496_22 HRGMv2_1496_22_10 13654 15594 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1496_22 HRGMv2_1496_22_11 15960 17573 + 3.A.1.5.27
TC HRGMv2_1496_22 HRGMv2_1496_22_12 17731 18687 + 3.A.1.5.38
TC HRGMv2_1496_22 HRGMv2_1496_22_13 18691 20706 + 3.A.1.5.25
TC HRGMv2_1496_22 HRGMv2_1496_22_14 20707 21534 + 3.A.1.5.27
CAZyme HRGMv2_1496_22 HRGMv2_1496_22_15 21666 22592 + CE7
Gene ID: HRGMv2_1496_22_6
Type: TC
Location: 6755 - 7585 (-)
Gene ID: HRGMv2_1496_22_7
Type: pfam
Location: 7845 - 10724 (+)
Gene ID: HRGMv2_1496_22_8
Type: pfam
Location: 10858 - 11358 (+)
Gene ID: HRGMv2_1496_22_9
Type: TC
Location: 11362 - 13647 (+)
Gene ID: HRGMv2_1496_22_10
Type: pfam
Location: 13654 - 15594 (+)
Gene ID: HRGMv2_1496_22_11
Type: TC
Location: 15960 - 17573 (+)
Gene ID: HRGMv2_1496_22_12
Type: TC
Location: 17731 - 18687 (+)
Gene ID: HRGMv2_1496_22_13
Type: TC
Location: 18691 - 20706 (+)
Gene ID: HRGMv2_1496_22_14
Type: TC
Location: 20707 - 21534 (+)
Gene ID: HRGMv2_1496_22_15
Type: CAZyme
Location: 21666 - 22592 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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