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Cluster: HRGMv2_1495_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1495_4 HRGMv2_1495_4_19 19836 20795 - GT2
pfam HRGMv2_1495_4 HRGMv2_1495_4_20 20901 21440 - Hexapep | Hexapep_2
pfam HRGMv2_1495_4 HRGMv2_1495_4_21 21519 22178 - DUF1919
CAZyme HRGMv2_1495_4 HRGMv2_1495_4_22 22175 23320 - GT4
CAZyme HRGMv2_1495_4 HRGMv2_1495_4_23 23322 24443 - GT4
NULL(UNKNOWN) HRGMv2_1495_4 HRGMv2_1495_4_24 24436 24762 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1495_4 HRGMv2_1495_4_25 24759 25607 - GT2
TC HRGMv2_1495_4 HRGMv2_1495_4_26 25610 26416 - 9.B.18.1.2
Gene ID: HRGMv2_1495_4_19
Type: CAZyme
Location: 19836 - 20795 (-)
Gene ID: HRGMv2_1495_4_20
Type: pfam
Location: 20901 - 21440 (-)
Gene ID: HRGMv2_1495_4_21
Type: pfam
Location: 21519 - 22178 (-)
Gene ID: HRGMv2_1495_4_22
Type: CAZyme
Location: 22175 - 23320 (-)
Gene ID: HRGMv2_1495_4_23
Type: CAZyme
Location: 23322 - 24443 (-)
Gene ID: HRGMv2_1495_4_24
Type:
Location: 24436 - 24762 (-)
Gene ID: HRGMv2_1495_4_25
Type: CAZyme
Location: 24759 - 25607 (-)
Gene ID: HRGMv2_1495_4_26
Type: TC
Location: 25610 - 26416 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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