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Cluster: HRGMv2_1495_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1495_39 HRGMv2_1495_39_3 3154 5604 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1495_39 HRGMv2_1495_39_4 5626 5745 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1495_39 HRGMv2_1495_39_5 5829 6548 + GntR
TC HRGMv2_1495_39 HRGMv2_1495_39_6 6855 8171 + 3.A.1.1.45
TC HRGMv2_1495_39 HRGMv2_1495_39_7 8259 9113 + 3.A.1.1.45
TC HRGMv2_1495_39 HRGMv2_1495_39_8 9113 9952 + 3.A.1.1.45
TC HRGMv2_1495_39 HRGMv2_1495_39_9 10021 11220 + 3.A.1.1.22
CAZyme HRGMv2_1495_39 HRGMv2_1495_39_10 11677 13944 - GT35
CAZyme HRGMv2_1495_39 HRGMv2_1495_39_11 14073 14897 - GH77
Gene ID: HRGMv2_1495_39_3
Type: TC
Location: 3154 - 5604 (-)
Gene ID: HRGMv2_1495_39_4
Type:
Location: 5626 - 5745 (+)
Gene ID: HRGMv2_1495_39_5
Type: TF
Location: 5829 - 6548 (+)
Gene ID: HRGMv2_1495_39_6
Type: TC
Location: 6855 - 8171 (+)
Gene ID: HRGMv2_1495_39_7
Type: TC
Location: 8259 - 9113 (+)
Gene ID: HRGMv2_1495_39_8
Type: TC
Location: 9113 - 9952 (+)
Gene ID: HRGMv2_1495_39_9
Type: TC
Location: 10021 - 11220 (+)
Gene ID: HRGMv2_1495_39_10
Type: CAZyme
Location: 11677 - 13944 (-)
Gene ID: HRGMv2_1495_39_11
Type: CAZyme
Location: 14073 - 14897 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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