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Cluster: HRGMv2_1493_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1493_30 HRGMv2_1493_30_2 2433 4322 - 2.A.114.1.3
pfam HRGMv2_1493_30 HRGMv2_1493_30_3 5658 6563 - PG_binding_1 | PG_binding_1
pfam HRGMv2_1493_30 HRGMv2_1493_30_4 6703 7716 - polyprenyl_synt
TC HRGMv2_1493_30 HRGMv2_1493_30_5 7843 10293 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1493_30 HRGMv2_1493_30_6 10315 10434 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1493_30 HRGMv2_1493_30_7 10518 11237 + GntR
TC HRGMv2_1493_30 HRGMv2_1493_30_8 11545 12861 + 3.A.1.1.45
TC HRGMv2_1493_30 HRGMv2_1493_30_9 12949 13803 + 3.A.1.1.45
TC HRGMv2_1493_30 HRGMv2_1493_30_10 13803 14642 + 3.A.1.1.45
TC HRGMv2_1493_30 HRGMv2_1493_30_11 14711 15910 + 3.A.1.1.22
CAZyme HRGMv2_1493_30 HRGMv2_1493_30_12 16363 18630 - GT35
CAZyme HRGMv2_1493_30 HRGMv2_1493_30_13 18759 20264 - GH77
Gene ID: HRGMv2_1493_30_2
Type: TC
Location: 2433 - 4322 (-)
Gene ID: HRGMv2_1493_30_3
Type: pfam
Location: 5658 - 6563 (-)
Gene ID: HRGMv2_1493_30_4
Type: pfam
Location: 6703 - 7716 (-)
Gene ID: HRGMv2_1493_30_5
Type: TC
Location: 7843 - 10293 (-)
Gene ID: HRGMv2_1493_30_6
Type:
Location: 10315 - 10434 (+)
Gene ID: HRGMv2_1493_30_7
Type: TF
Location: 10518 - 11237 (+)
Gene ID: HRGMv2_1493_30_8
Type: TC
Location: 11545 - 12861 (+)
Gene ID: HRGMv2_1493_30_9
Type: TC
Location: 12949 - 13803 (+)
Gene ID: HRGMv2_1493_30_10
Type: TC
Location: 13803 - 14642 (+)
Gene ID: HRGMv2_1493_30_11
Type: TC
Location: 14711 - 15910 (+)
Gene ID: HRGMv2_1493_30_12
Type: CAZyme
Location: 16363 - 18630 (-)
Gene ID: HRGMv2_1493_30_13
Type: CAZyme
Location: 18759 - 20264 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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