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Cluster: HRGMv2_1493_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1493_22 HRGMv2_1493_22_10 11275 13524 + 1.I.1.1.3
STP HRGMv2_1493_22 HRGMv2_1493_22_11 14146 14907 + Fer4
TC HRGMv2_1493_22 HRGMv2_1493_22_12 15188 15700 + 4.A.1.2.5
pfam HRGMv2_1493_22 HRGMv2_1493_22_13 15719 16573 + PRD | PRD | CAT_RBD
TC HRGMv2_1493_22 HRGMv2_1493_22_14 16673 18289 + 4.A.1.1.3
CAZyme HRGMv2_1493_22 HRGMv2_1493_22_15 18293 19675 + GH4
STP HRGMv2_1493_22 HRGMv2_1493_22_16 19933 21765 + Pyr_redox_2
TC HRGMv2_1493_22 HRGMv2_1493_22_17 21759 23570 + 3.D.1.5.1
pfam HRGMv2_1493_22 HRGMv2_1493_22_18 23573 24631 + NMT1
TC HRGMv2_1493_22 HRGMv2_1493_22_19 24635 26014 + 3.A.1.125.5
Gene ID: HRGMv2_1493_22_10
Type: TC
Location: 11275 - 13524 (+)
Gene ID: HRGMv2_1493_22_11
Type: STP
Location: 14146 - 14907 (+)
Gene ID: HRGMv2_1493_22_12
Type: TC
Location: 15188 - 15700 (+)
Gene ID: HRGMv2_1493_22_13
Type: pfam
Location: 15719 - 16573 (+)
Gene ID: HRGMv2_1493_22_14
Type: TC
Location: 16673 - 18289 (+)
Gene ID: HRGMv2_1493_22_15
Type: CAZyme
Location: 18293 - 19675 (+)
Gene ID: HRGMv2_1493_22_16
Type: STP
Location: 19933 - 21765 (+)
Gene ID: HRGMv2_1493_22_17
Type: TC
Location: 21759 - 23570 (+)
Gene ID: HRGMv2_1493_22_18
Type: pfam
Location: 23573 - 24631 (+)
Gene ID: HRGMv2_1493_22_19
Type: TC
Location: 24635 - 26014 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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