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Cluster: HRGMv2_1493_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1493_34 HRGMv2_1493_34_3 2146 3612 - 2.A.66.2.23
pfam HRGMv2_1493_34 HRGMv2_1493_34_4 3697 4644 - ATPgrasp_TupA
pfam HRGMv2_1493_34 HRGMv2_1493_34_5 4788 5876 - EpsG
CAZyme HRGMv2_1493_34 HRGMv2_1493_34_6 5873 6976 - GT4
pfam HRGMv2_1493_34 HRGMv2_1493_34_7 6973 7920 - C5-epim_C
CAZyme HRGMv2_1493_34 HRGMv2_1493_34_8 7920 9212 - GT4
pfam HRGMv2_1493_34 HRGMv2_1493_34_9 9218 10489 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_1493_34 HRGMv2_1493_34_10 10533 11450 - GT2
TC HRGMv2_1493_34 HRGMv2_1493_34_11 11454 12218 - 9.B.18.1.2
Gene ID: HRGMv2_1493_34_3
Type: TC
Location: 2146 - 3612 (-)
Gene ID: HRGMv2_1493_34_4
Type: pfam
Location: 3697 - 4644 (-)
Gene ID: HRGMv2_1493_34_5
Type: pfam
Location: 4788 - 5876 (-)
Gene ID: HRGMv2_1493_34_6
Type: CAZyme
Location: 5873 - 6976 (-)
Gene ID: HRGMv2_1493_34_7
Type: pfam
Location: 6973 - 7920 (-)
Gene ID: HRGMv2_1493_34_8
Type: CAZyme
Location: 7920 - 9212 (-)
Gene ID: HRGMv2_1493_34_9
Type: pfam
Location: 9218 - 10489 (-)
Gene ID: HRGMv2_1493_34_10
Type: CAZyme
Location: 10533 - 11450 (-)
Gene ID: HRGMv2_1493_34_11
Type: TC
Location: 11454 - 12218 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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