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Cluster: HRGMv2_1492_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1492_9 HRGMv2_1492_9_33 37998 38336 - 4.A.3.1.2
TF HRGMv2_1492_9 HRGMv2_1492_9_34 38550 39554 - LacI
TC HRGMv2_1492_9 HRGMv2_1492_9_35 39911 41683 + 4.A.3.1.1
CAZyme HRGMv2_1492_9 HRGMv2_1492_9_36 41750 43189 + GH1
TF HRGMv2_1492_9 HRGMv2_1492_9_37 43473 44510 - LacI
CAZyme HRGMv2_1492_9 HRGMv2_1492_9_38 44851 46293 + GH1
TC HRGMv2_1492_9 HRGMv2_1492_9_39 46470 48230 + 4.A.3.1.1
TF HRGMv2_1492_9 HRGMv2_1492_9_40 48644 49654 - LacI
TC HRGMv2_1492_9 HRGMv2_1492_9_41 49931 51709 + 4.A.3.1.1
CAZyme HRGMv2_1492_9 HRGMv2_1492_9_42 51784 53205 + GH1
Gene ID: HRGMv2_1492_9_33
Type: TC
Location: 37998 - 38336 (-)
Gene ID: HRGMv2_1492_9_34
Type: TF
Location: 38550 - 39554 (-)
Gene ID: HRGMv2_1492_9_35
Type: TC
Location: 39911 - 41683 (+)
Gene ID: HRGMv2_1492_9_36
Type: CAZyme
Location: 41750 - 43189 (+)
Gene ID: HRGMv2_1492_9_37
Type: TF
Location: 43473 - 44510 (-)
Gene ID: HRGMv2_1492_9_38
Type: CAZyme
Location: 44851 - 46293 (+)
Gene ID: HRGMv2_1492_9_39
Type: TC
Location: 46470 - 48230 (+)
Gene ID: HRGMv2_1492_9_40
Type: TF
Location: 48644 - 49654 (-)
Gene ID: HRGMv2_1492_9_41
Type: TC
Location: 49931 - 51709 (+)
Gene ID: HRGMv2_1492_9_42
Type: CAZyme
Location: 51784 - 53205 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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