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Cluster: HRGMv2_1492_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1492_7 HRGMv2_1492_7_76 87966 89471 + GH77
CAZyme HRGMv2_1492_7 HRGMv2_1492_7_77 89600 91867 + GT35
TC HRGMv2_1492_7 HRGMv2_1492_7_78 92239 93435 - 3.A.1.1.22
TC HRGMv2_1492_7 HRGMv2_1492_7_79 93504 94343 - 3.A.1.1.45
TC HRGMv2_1492_7 HRGMv2_1492_7_80 94343 95197 - 3.A.1.1.45
TC HRGMv2_1492_7 HRGMv2_1492_7_81 95285 96601 - 3.A.1.1.45
TF HRGMv2_1492_7 HRGMv2_1492_7_82 96908 97627 - GntR
NULL(UNKNOWN) HRGMv2_1492_7 HRGMv2_1492_7_83 97711 97830 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1492_7 HRGMv2_1492_7_84 97852 100302 + 4.A.1.1.8
Gene ID: HRGMv2_1492_7_76
Type: CAZyme
Location: 87966 - 89471 (+)
Gene ID: HRGMv2_1492_7_77
Type: CAZyme
Location: 89600 - 91867 (+)
Gene ID: HRGMv2_1492_7_78
Type: TC
Location: 92239 - 93435 (-)
Gene ID: HRGMv2_1492_7_79
Type: TC
Location: 93504 - 94343 (-)
Gene ID: HRGMv2_1492_7_80
Type: TC
Location: 94343 - 95197 (-)
Gene ID: HRGMv2_1492_7_81
Type: TC
Location: 95285 - 96601 (-)
Gene ID: HRGMv2_1492_7_82
Type: TF
Location: 96908 - 97627 (-)
Gene ID: HRGMv2_1492_7_83
Type:
Location: 97711 - 97830 (-)
Gene ID: HRGMv2_1492_7_84
Type: TC
Location: 97852 - 100302 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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