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Cluster: HRGMv2_1492_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1492_24 HRGMv2_1492_24_7 8430 10112 + 2.A.66.4.4
pfam HRGMv2_1492_24 HRGMv2_1492_24_8 10119 12059 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1492_24 HRGMv2_1492_24_9 12425 14038 + 3.A.1.5.27
TC HRGMv2_1492_24 HRGMv2_1492_24_10 14196 15152 + 3.A.1.5.38
TC HRGMv2_1492_24 HRGMv2_1492_24_11 15156 17171 + 3.A.1.5.25
TC HRGMv2_1492_24 HRGMv2_1492_24_12 17172 17999 + 3.A.1.5.27
CAZyme HRGMv2_1492_24 HRGMv2_1492_24_13 18131 19057 + CE7
Gene ID: HRGMv2_1492_24_7
Type: TC
Location: 8430 - 10112 (+)
Gene ID: HRGMv2_1492_24_8
Type: pfam
Location: 10119 - 12059 (+)
Gene ID: HRGMv2_1492_24_9
Type: TC
Location: 12425 - 14038 (+)
Gene ID: HRGMv2_1492_24_10
Type: TC
Location: 14196 - 15152 (+)
Gene ID: HRGMv2_1492_24_11
Type: TC
Location: 15156 - 17171 (+)
Gene ID: HRGMv2_1492_24_12
Type: TC
Location: 17172 - 17999 (+)
Gene ID: HRGMv2_1492_24_13
Type: CAZyme
Location: 18131 - 19057 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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