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Cluster: HRGMv2_1492_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1492_10 HRGMv2_1492_10_13 15714 18482 - 3.A.3.4.1
STP HRGMv2_1492_10 HRGMv2_1492_10_14 18919 19599 + Pribosyltran
TF HRGMv2_1492_10 HRGMv2_1492_10_15 19944 20798 - HTH_6
CAZyme HRGMv2_1492_10 HRGMv2_1492_10_16 20965 23556 - GH106
TF HRGMv2_1492_10 HRGMv2_1492_10_17 23671 24663 + 0035607
CAZyme HRGMv2_1492_10 HRGMv2_1492_10_18 24834 26273 + GH1
pfam HRGMv2_1492_10 HRGMv2_1492_10_19 26504 27349 + Hydrolase_3
TC HRGMv2_1492_10 HRGMv2_1492_10_20 27490 28026 + 4.A.1.2.6
Gene ID: HRGMv2_1492_10_13
Type: TC
Location: 15714 - 18482 (-)
Gene ID: HRGMv2_1492_10_14
Type: STP
Location: 18919 - 19599 (+)
Gene ID: HRGMv2_1492_10_15
Type: TF
Location: 19944 - 20798 (-)
Gene ID: HRGMv2_1492_10_16
Type: CAZyme
Location: 20965 - 23556 (-)
Gene ID: HRGMv2_1492_10_17
Type: TF
Location: 23671 - 24663 (+)
Gene ID: HRGMv2_1492_10_18
Type: CAZyme
Location: 24834 - 26273 (+)
Gene ID: HRGMv2_1492_10_19
Type: pfam
Location: 26504 - 27349 (+)
Gene ID: HRGMv2_1492_10_20
Type: TC
Location: 27490 - 28026 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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