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Cluster: HRGMv2_1492_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1492_1 HRGMv2_1492_1_136 175892 177271 - 3.A.1.17.10
pfam HRGMv2_1492_1 HRGMv2_1492_1_137 177275 178324 - NMT1
TC HRGMv2_1492_1 HRGMv2_1492_1_138 178327 180138 - 3.D.1.5.1
STP HRGMv2_1492_1 HRGMv2_1492_1_139 180132 181964 - Pyr_redox_2
CAZyme HRGMv2_1492_1 HRGMv2_1492_1_140 182221 183603 - GH4
TC HRGMv2_1492_1 HRGMv2_1492_1_141 183607 185223 - 4.A.1.1.3
pfam HRGMv2_1492_1 HRGMv2_1492_1_142 185323 186189 - PRD | PRD | CAT_RBD
TC HRGMv2_1492_1 HRGMv2_1492_1_143 186196 186708 - 4.A.1.2.5
STP HRGMv2_1492_1 HRGMv2_1492_1_144 187111 187872 - Fer4 | Fer4
TC HRGMv2_1492_1 HRGMv2_1492_1_145 188493 190742 - 1.I.1.1.3
Gene ID: HRGMv2_1492_1_136
Type: TC
Location: 175892 - 177271 (-)
Gene ID: HRGMv2_1492_1_137
Type: pfam
Location: 177275 - 178324 (-)
Gene ID: HRGMv2_1492_1_138
Type: TC
Location: 178327 - 180138 (-)
Gene ID: HRGMv2_1492_1_139
Type: STP
Location: 180132 - 181964 (-)
Gene ID: HRGMv2_1492_1_140
Type: CAZyme
Location: 182221 - 183603 (-)
Gene ID: HRGMv2_1492_1_141
Type: TC
Location: 183607 - 185223 (-)
Gene ID: HRGMv2_1492_1_142
Type: pfam
Location: 185323 - 186189 (-)
Gene ID: HRGMv2_1492_1_143
Type: TC
Location: 186196 - 186708 (-)
Gene ID: HRGMv2_1492_1_144
Type: STP
Location: 187111 - 187872 (-)
Gene ID: HRGMv2_1492_1_145
Type: TC
Location: 188493 - 190742 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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