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Cluster: HRGMv2_1491_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1491_1 HRGMv2_1491_1_55 61741 64083 - 3.A.3.5.15
STP HRGMv2_1491_1 HRGMv2_1491_1_56 64656 66740 - Pkinase
STP HRGMv2_1491_1 HRGMv2_1491_1_57 66912 67874 - FHA
TC HRGMv2_1491_1 HRGMv2_1491_1_58 68454 70703 + 1.I.1.1.3
STP HRGMv2_1491_1 HRGMv2_1491_1_59 71322 72083 + Fer4
TC HRGMv2_1491_1 HRGMv2_1491_1_60 72427 72939 + 4.A.1.2.5
pfam HRGMv2_1491_1 HRGMv2_1491_1_61 72958 73812 + PRD | PRD | CAT_RBD
TC HRGMv2_1491_1 HRGMv2_1491_1_62 73912 75528 + 4.A.1.1.3
CAZyme HRGMv2_1491_1 HRGMv2_1491_1_63 75532 76914 + GH4
Gene ID: HRGMv2_1491_1_55
Type: TC
Location: 61741 - 64083 (-)
Gene ID: HRGMv2_1491_1_56
Type: STP
Location: 64656 - 66740 (-)
Gene ID: HRGMv2_1491_1_57
Type: STP
Location: 66912 - 67874 (-)
Gene ID: HRGMv2_1491_1_58
Type: TC
Location: 68454 - 70703 (+)
Gene ID: HRGMv2_1491_1_59
Type: STP
Location: 71322 - 72083 (+)
Gene ID: HRGMv2_1491_1_60
Type: TC
Location: 72427 - 72939 (+)
Gene ID: HRGMv2_1491_1_61
Type: pfam
Location: 72958 - 73812 (+)
Gene ID: HRGMv2_1491_1_62
Type: TC
Location: 73912 - 75528 (+)
Gene ID: HRGMv2_1491_1_63
Type: CAZyme
Location: 75532 - 76914 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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