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Cluster: HRGMv2_1491_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1491_37 HRGMv2_1491_37_12 11969 12307 - 4.A.3.1.2
TF HRGMv2_1491_37 HRGMv2_1491_37_13 12522 13526 - LacI
TC HRGMv2_1491_37 HRGMv2_1491_37_14 13883 15658 + 4.A.3.1.1
CAZyme HRGMv2_1491_37 HRGMv2_1491_37_15 15725 17164 + GH1
TF HRGMv2_1491_37 HRGMv2_1491_37_16 17605 18615 - LacI
TC HRGMv2_1491_37 HRGMv2_1491_37_17 18891 20669 + 4.A.3.1.1
CAZyme HRGMv2_1491_37 HRGMv2_1491_37_18 20746 22167 + GH1
Gene ID: HRGMv2_1491_37_12
Type: TC
Location: 11969 - 12307 (-)
Gene ID: HRGMv2_1491_37_13
Type: TF
Location: 12522 - 13526 (-)
Gene ID: HRGMv2_1491_37_14
Type: TC
Location: 13883 - 15658 (+)
Gene ID: HRGMv2_1491_37_15
Type: CAZyme
Location: 15725 - 17164 (+)
Gene ID: HRGMv2_1491_37_16
Type: TF
Location: 17605 - 18615 (-)
Gene ID: HRGMv2_1491_37_17
Type: TC
Location: 18891 - 20669 (+)
Gene ID: HRGMv2_1491_37_18
Type: CAZyme
Location: 20746 - 22167 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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