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Cluster: HRGMv2_1491_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1491_16 HRGMv2_1491_16_19 21581 22507 - CE7
TC HRGMv2_1491_16 HRGMv2_1491_16_20 22639 23466 - 3.A.1.5.27
TC HRGMv2_1491_16 HRGMv2_1491_16_21 23467 25482 - 3.A.1.5.25
TC HRGMv2_1491_16 HRGMv2_1491_16_22 25486 26442 - 3.A.1.5.38
TC HRGMv2_1491_16 HRGMv2_1491_16_23 26600 28213 - 3.A.1.5.27
pfam HRGMv2_1491_16 HRGMv2_1491_16_24 28579 30519 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1491_16 HRGMv2_1491_16_25 30526 32208 - 2.A.66.4.4
Gene ID: HRGMv2_1491_16_19
Type: CAZyme
Location: 21581 - 22507 (-)
Gene ID: HRGMv2_1491_16_20
Type: TC
Location: 22639 - 23466 (-)
Gene ID: HRGMv2_1491_16_21
Type: TC
Location: 23467 - 25482 (-)
Gene ID: HRGMv2_1491_16_22
Type: TC
Location: 25486 - 26442 (-)
Gene ID: HRGMv2_1491_16_23
Type: TC
Location: 26600 - 28213 (-)
Gene ID: HRGMv2_1491_16_24
Type: pfam
Location: 28579 - 30519 (-)
Gene ID: HRGMv2_1491_16_25
Type: TC
Location: 30526 - 32208 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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