dbCAN Logo

Cluster: HRGMv2_1490_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1490_10 HRGMv2_1490_10_17 16485 17411 - CE7
TC HRGMv2_1490_10 HRGMv2_1490_10_18 17543 18370 - 3.A.1.5.27
TC HRGMv2_1490_10 HRGMv2_1490_10_19 18371 20386 - 3.A.1.5.25
TC HRGMv2_1490_10 HRGMv2_1490_10_20 20390 21346 - 3.A.1.5.38
TC HRGMv2_1490_10 HRGMv2_1490_10_21 21504 23117 - 3.A.1.5.27
pfam HRGMv2_1490_10 HRGMv2_1490_10_22 23483 25423 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1490_10 HRGMv2_1490_10_23 25430 27112 - 2.A.66.4.4
Gene ID: HRGMv2_1490_10_17
Type: CAZyme
Location: 16485 - 17411 (-)
Gene ID: HRGMv2_1490_10_18
Type: TC
Location: 17543 - 18370 (-)
Gene ID: HRGMv2_1490_10_19
Type: TC
Location: 18371 - 20386 (-)
Gene ID: HRGMv2_1490_10_20
Type: TC
Location: 20390 - 21346 (-)
Gene ID: HRGMv2_1490_10_21
Type: TC
Location: 21504 - 23117 (-)
Gene ID: HRGMv2_1490_10_22
Type: pfam
Location: 23483 - 25423 (-)
Gene ID: HRGMv2_1490_10_23
Type: TC
Location: 25430 - 27112 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List