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Cluster: HRGMv2_1489_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1489_11 HRGMv2_1489_11_12 14262 16598 - 3.A.3.5.15
TC HRGMv2_1489_11 HRGMv2_1489_11_13 17159 19381 + 1.I.1.1.3
TC HRGMv2_1489_11 HRGMv2_1489_11_14 20484 20996 + 4.A.1.2.5
pfam HRGMv2_1489_11 HRGMv2_1489_11_15 21003 21869 + PRD | PRD | CAT_RBD
TC HRGMv2_1489_11 HRGMv2_1489_11_16 21969 23585 + 4.A.1.1.3
CAZyme HRGMv2_1489_11 HRGMv2_1489_11_17 23589 24971 + GH4
STP HRGMv2_1489_11 HRGMv2_1489_11_18 25228 27060 + Pyr_redox_2
TC HRGMv2_1489_11 HRGMv2_1489_11_19 27054 28403 + 3.D.1.5.1
Gene ID: HRGMv2_1489_11_12
Type: TC
Location: 14262 - 16598 (-)
Gene ID: HRGMv2_1489_11_13
Type: TC
Location: 17159 - 19381 (+)
Gene ID: HRGMv2_1489_11_14
Type: TC
Location: 20484 - 20996 (+)
Gene ID: HRGMv2_1489_11_15
Type: pfam
Location: 21003 - 21869 (+)
Gene ID: HRGMv2_1489_11_16
Type: TC
Location: 21969 - 23585 (+)
Gene ID: HRGMv2_1489_11_17
Type: CAZyme
Location: 23589 - 24971 (+)
Gene ID: HRGMv2_1489_11_18
Type: STP
Location: 25228 - 27060 (+)
Gene ID: HRGMv2_1489_11_19
Type: TC
Location: 27054 - 28403 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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