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Cluster: HRGMv2_1487_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1487_29 HRGMv2_1487_29_3 2861 4366 + GH77
CAZyme HRGMv2_1487_29 HRGMv2_1487_29_4 4495 6762 + GT35
TC HRGMv2_1487_29 HRGMv2_1487_29_5 7219 8418 - 3.A.1.1.22
TC HRGMv2_1487_29 HRGMv2_1487_29_6 8487 9326 - 3.A.1.1.45
TC HRGMv2_1487_29 HRGMv2_1487_29_7 9326 10180 - 3.A.1.1.45
TC HRGMv2_1487_29 HRGMv2_1487_29_8 10268 11584 - 3.A.1.1.45
TF HRGMv2_1487_29 HRGMv2_1487_29_9 11891 12610 - GntR
NULL(UNKNOWN) HRGMv2_1487_29 HRGMv2_1487_29_10 12694 12813 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1487_29 HRGMv2_1487_29_11 12835 15285 + 4.A.1.1.8
Gene ID: HRGMv2_1487_29_3
Type: CAZyme
Location: 2861 - 4366 (+)
Gene ID: HRGMv2_1487_29_4
Type: CAZyme
Location: 4495 - 6762 (+)
Gene ID: HRGMv2_1487_29_5
Type: TC
Location: 7219 - 8418 (-)
Gene ID: HRGMv2_1487_29_6
Type: TC
Location: 8487 - 9326 (-)
Gene ID: HRGMv2_1487_29_7
Type: TC
Location: 9326 - 10180 (-)
Gene ID: HRGMv2_1487_29_8
Type: TC
Location: 10268 - 11584 (-)
Gene ID: HRGMv2_1487_29_9
Type: TF
Location: 11891 - 12610 (-)
Gene ID: HRGMv2_1487_29_10
Type:
Location: 12694 - 12813 (-)
Gene ID: HRGMv2_1487_29_11
Type: TC
Location: 12835 - 15285 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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