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Cluster: HRGMv2_1484_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1484_24 HRGMv2_1484_24_1 2 616 - CE7
TC HRGMv2_1484_24 HRGMv2_1484_24_2 748 1575 - 3.A.1.5.27
TC HRGMv2_1484_24 HRGMv2_1484_24_3 1576 3591 - 3.A.1.5.25
TC HRGMv2_1484_24 HRGMv2_1484_24_4 3595 4551 - 3.A.1.5.38
TC HRGMv2_1484_24 HRGMv2_1484_24_5 4709 6322 - 3.A.1.5.27
pfam HRGMv2_1484_24 HRGMv2_1484_24_6 6688 8628 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1484_24 HRGMv2_1484_24_7 8635 10317 - 2.A.66.4.4
Gene ID: HRGMv2_1484_24_1
Type: CAZyme
Location: 2 - 616 (-)
Gene ID: HRGMv2_1484_24_2
Type: TC
Location: 748 - 1575 (-)
Gene ID: HRGMv2_1484_24_3
Type: TC
Location: 1576 - 3591 (-)
Gene ID: HRGMv2_1484_24_4
Type: TC
Location: 3595 - 4551 (-)
Gene ID: HRGMv2_1484_24_5
Type: TC
Location: 4709 - 6322 (-)
Gene ID: HRGMv2_1484_24_6
Type: pfam
Location: 6688 - 8628 (-)
Gene ID: HRGMv2_1484_24_7
Type: TC
Location: 8635 - 10317 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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