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Cluster: HRGMv2_1484_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1484_9 HRGMv2_1484_9_2 810 1253 + 4.A.6.1.16
pfam HRGMv2_1484_9 HRGMv2_1484_9_3 1253 1534 + YajC
TC HRGMv2_1484_9 HRGMv2_1484_9_4 1571 2053 + 4.A.6.1.4
TC HRGMv2_1484_9 HRGMv2_1484_9_5 2143 2943 + 4.A.6.1.4
TC HRGMv2_1484_9 HRGMv2_1484_9_6 2933 4015 + 4.A.6.1.4
TF HRGMv2_1484_9 HRGMv2_1484_9_7 4200 4931 + GntR
STP HRGMv2_1484_9 HRGMv2_1484_9_8 5046 6212 + SIS | SIS
CAZyme HRGMv2_1484_9 HRGMv2_1484_9_9 6330 7499 + CE9
Gene ID: HRGMv2_1484_9_2
Type: TC
Location: 810 - 1253 (+)
Gene ID: HRGMv2_1484_9_3
Type: pfam
Location: 1253 - 1534 (+)
Gene ID: HRGMv2_1484_9_4
Type: TC
Location: 1571 - 2053 (+)
Gene ID: HRGMv2_1484_9_5
Type: TC
Location: 2143 - 2943 (+)
Gene ID: HRGMv2_1484_9_6
Type: TC
Location: 2933 - 4015 (+)
Gene ID: HRGMv2_1484_9_7
Type: TF
Location: 4200 - 4931 (+)
Gene ID: HRGMv2_1484_9_8
Type: STP
Location: 5046 - 6212 (+)
Gene ID: HRGMv2_1484_9_9
Type: CAZyme
Location: 6330 - 7499 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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