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Cluster: HRGMv2_1484_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1484_33 HRGMv2_1484_33_4 5398 7848 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1484_33 HRGMv2_1484_33_5 7870 7989 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1484_33 HRGMv2_1484_33_6 8073 8792 + GntR
TC HRGMv2_1484_33 HRGMv2_1484_33_7 9099 10415 + 3.A.1.1.45
TC HRGMv2_1484_33 HRGMv2_1484_33_8 10503 11357 + 3.A.1.1.45
TC HRGMv2_1484_33 HRGMv2_1484_33_9 11357 12196 + 3.A.1.1.45
TC HRGMv2_1484_33 HRGMv2_1484_33_10 12265 13461 + 3.A.1.1.22
CAZyme HRGMv2_1484_33 HRGMv2_1484_33_11 13918 16185 - GT35
CAZyme HRGMv2_1484_33 HRGMv2_1484_33_12 16315 17820 - GH77
Gene ID: HRGMv2_1484_33_4
Type: TC
Location: 5398 - 7848 (-)
Gene ID: HRGMv2_1484_33_5
Type:
Location: 7870 - 7989 (+)
Gene ID: HRGMv2_1484_33_6
Type: TF
Location: 8073 - 8792 (+)
Gene ID: HRGMv2_1484_33_7
Type: TC
Location: 9099 - 10415 (+)
Gene ID: HRGMv2_1484_33_8
Type: TC
Location: 10503 - 11357 (+)
Gene ID: HRGMv2_1484_33_9
Type: TC
Location: 11357 - 12196 (+)
Gene ID: HRGMv2_1484_33_10
Type: TC
Location: 12265 - 13461 (+)
Gene ID: HRGMv2_1484_33_11
Type: CAZyme
Location: 13918 - 16185 (-)
Gene ID: HRGMv2_1484_33_12
Type: CAZyme
Location: 16315 - 17820 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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