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Cluster: HRGMv2_1482_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1482_9 HRGMv2_1482_9_11 14988 17438 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1482_9 HRGMv2_1482_9_12 17460 17579 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1482_9 HRGMv2_1482_9_13 17663 18382 + GntR
TC HRGMv2_1482_9 HRGMv2_1482_9_14 18689 20005 + 3.A.1.1.45
TC HRGMv2_1482_9 HRGMv2_1482_9_15 20093 20947 + 3.A.1.1.45
TC HRGMv2_1482_9 HRGMv2_1482_9_16 20947 21786 + 3.A.1.1.45
TC HRGMv2_1482_9 HRGMv2_1482_9_17 21855 23054 + 3.A.1.1.22
CAZyme HRGMv2_1482_9 HRGMv2_1482_9_18 23591 25858 - GT35
CAZyme HRGMv2_1482_9 HRGMv2_1482_9_19 25987 27492 - GH77
Gene ID: HRGMv2_1482_9_11
Type: TC
Location: 14988 - 17438 (-)
Gene ID: HRGMv2_1482_9_12
Type:
Location: 17460 - 17579 (+)
Gene ID: HRGMv2_1482_9_13
Type: TF
Location: 17663 - 18382 (+)
Gene ID: HRGMv2_1482_9_14
Type: TC
Location: 18689 - 20005 (+)
Gene ID: HRGMv2_1482_9_15
Type: TC
Location: 20093 - 20947 (+)
Gene ID: HRGMv2_1482_9_16
Type: TC
Location: 20947 - 21786 (+)
Gene ID: HRGMv2_1482_9_17
Type: TC
Location: 21855 - 23054 (+)
Gene ID: HRGMv2_1482_9_18
Type: CAZyme
Location: 23591 - 25858 (-)
Gene ID: HRGMv2_1482_9_19
Type: CAZyme
Location: 25987 - 27492 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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