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Cluster: HRGMv2_1482_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1482_28 HRGMv2_1482_28_10 13589 15271 + 2.A.66.4.4
pfam HRGMv2_1482_28 HRGMv2_1482_28_11 15278 17218 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1482_28 HRGMv2_1482_28_12 17584 19197 + 3.A.1.5.27
TC HRGMv2_1482_28 HRGMv2_1482_28_13 19355 20311 + 3.A.1.5.38
TC HRGMv2_1482_28 HRGMv2_1482_28_14 20315 22330 + 3.A.1.5.25
TC HRGMv2_1482_28 HRGMv2_1482_28_15 22331 23158 + 3.A.1.5.27
CAZyme HRGMv2_1482_28 HRGMv2_1482_28_16 23290 24216 + CE7
Gene ID: HRGMv2_1482_28_10
Type: TC
Location: 13589 - 15271 (+)
Gene ID: HRGMv2_1482_28_11
Type: pfam
Location: 15278 - 17218 (+)
Gene ID: HRGMv2_1482_28_12
Type: TC
Location: 17584 - 19197 (+)
Gene ID: HRGMv2_1482_28_13
Type: TC
Location: 19355 - 20311 (+)
Gene ID: HRGMv2_1482_28_14
Type: TC
Location: 20315 - 22330 (+)
Gene ID: HRGMv2_1482_28_15
Type: TC
Location: 22331 - 23158 (+)
Gene ID: HRGMv2_1482_28_16
Type: CAZyme
Location: 23290 - 24216 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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