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Cluster: HRGMv2_1482_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1482_12 HRGMv2_1482_12_36 41999 44341 - 3.A.3.5.15
STP HRGMv2_1482_12 HRGMv2_1482_12_37 44753 46837 - Pkinase
STP HRGMv2_1482_12 HRGMv2_1482_12_38 47009 47971 - FHA
TC HRGMv2_1482_12 HRGMv2_1482_12_39 48570 50825 + 1.I.1.1.3
TC HRGMv2_1482_12 HRGMv2_1482_12_40 51186 51698 + 4.A.1.2.5
pfam HRGMv2_1482_12 HRGMv2_1482_12_41 51705 52571 + PRD | PRD | CAT_RBD
TC HRGMv2_1482_12 HRGMv2_1482_12_42 52671 54287 + 4.A.1.1.3
CAZyme HRGMv2_1482_12 HRGMv2_1482_12_43 54291 55673 + GH4
Gene ID: HRGMv2_1482_12_36
Type: TC
Location: 41999 - 44341 (-)
Gene ID: HRGMv2_1482_12_37
Type: STP
Location: 44753 - 46837 (-)
Gene ID: HRGMv2_1482_12_38
Type: STP
Location: 47009 - 47971 (-)
Gene ID: HRGMv2_1482_12_39
Type: TC
Location: 48570 - 50825 (+)
Gene ID: HRGMv2_1482_12_40
Type: TC
Location: 51186 - 51698 (+)
Gene ID: HRGMv2_1482_12_41
Type: pfam
Location: 51705 - 52571 (+)
Gene ID: HRGMv2_1482_12_42
Type: TC
Location: 52671 - 54287 (+)
Gene ID: HRGMv2_1482_12_43
Type: CAZyme
Location: 54291 - 55673 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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