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Cluster: HRGMv2_1481_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1481_3 HRGMv2_1481_3_83 84643 85527 - CE7
TC HRGMv2_1481_3 HRGMv2_1481_3_84 85701 86528 - 3.A.1.5.27
TC HRGMv2_1481_3 HRGMv2_1481_3_85 86529 88544 - 3.A.1.5.25
TC HRGMv2_1481_3 HRGMv2_1481_3_86 88548 89504 - 3.A.1.5.38
TC HRGMv2_1481_3 HRGMv2_1481_3_87 89662 91275 - 3.A.1.5.27
pfam HRGMv2_1481_3 HRGMv2_1481_3_88 91641 93581 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1481_3 HRGMv2_1481_3_89 93588 95270 - 2.A.66.4.4
Gene ID: HRGMv2_1481_3_83
Type: CAZyme
Location: 84643 - 85527 (-)
Gene ID: HRGMv2_1481_3_84
Type: TC
Location: 85701 - 86528 (-)
Gene ID: HRGMv2_1481_3_85
Type: TC
Location: 86529 - 88544 (-)
Gene ID: HRGMv2_1481_3_86
Type: TC
Location: 88548 - 89504 (-)
Gene ID: HRGMv2_1481_3_87
Type: TC
Location: 89662 - 91275 (-)
Gene ID: HRGMv2_1481_3_88
Type: pfam
Location: 91641 - 93581 (-)
Gene ID: HRGMv2_1481_3_89
Type: TC
Location: 93588 - 95270 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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