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Cluster: HRGMv2_1481_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1481_3 HRGMv2_1481_3_64 61008 62741 - GH13_30
STP HRGMv2_1481_3 HRGMv2_1481_3_65 63513 64259 - STAS
STP HRGMv2_1481_3 HRGMv2_1481_3_66 64341 66686 - GAF | SpoIIE
TC HRGMv2_1481_3 HRGMv2_1481_3_67 67430 68458 - 3.A.1.5.36
TC HRGMv2_1481_3 HRGMv2_1481_3_68 68458 69549 - 3.A.1.5.34
TC HRGMv2_1481_3 HRGMv2_1481_3_69 69552 70487 - 3.A.1.5.11
TC HRGMv2_1481_3 HRGMv2_1481_3_70 70502 71539 - 3.A.1.5.37
TC HRGMv2_1481_3 HRGMv2_1481_3_71 71695 73371 - 3.A.1.5.35
Gene ID: HRGMv2_1481_3_64
Type: CAZyme
Location: 61008 - 62741 (-)
Gene ID: HRGMv2_1481_3_65
Type: STP
Location: 63513 - 64259 (-)
Gene ID: HRGMv2_1481_3_66
Type: STP
Location: 64341 - 66686 (-)
Gene ID: HRGMv2_1481_3_67
Type: TC
Location: 67430 - 68458 (-)
Gene ID: HRGMv2_1481_3_68
Type: TC
Location: 68458 - 69549 (-)
Gene ID: HRGMv2_1481_3_69
Type: TC
Location: 69552 - 70487 (-)
Gene ID: HRGMv2_1481_3_70
Type: TC
Location: 70502 - 71539 (-)
Gene ID: HRGMv2_1481_3_71
Type: TC
Location: 71695 - 73371 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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