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Cluster: HRGMv2_1481_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1481_19 HRGMv2_1481_19_9 9594 10958 - 3.A.1.17.10
pfam HRGMv2_1481_19 HRGMv2_1481_19_10 10962 12020 - NMT1
TC HRGMv2_1481_19 HRGMv2_1481_19_11 12023 13834 - 3.D.1.5.1
STP HRGMv2_1481_19 HRGMv2_1481_19_12 13828 15660 - Pyr_redox_2
CAZyme HRGMv2_1481_19 HRGMv2_1481_19_13 15917 17299 - GH4
TC HRGMv2_1481_19 HRGMv2_1481_19_14 17303 18919 - 4.A.1.1.3
pfam HRGMv2_1481_19 HRGMv2_1481_19_15 19019 19885 - PRD | PRD | CAT_RBD
TC HRGMv2_1481_19 HRGMv2_1481_19_16 19892 20404 - 4.A.1.2.5
TC HRGMv2_1481_19 HRGMv2_1481_19_17 20881 23136 - 1.I.1.1.3
Gene ID: HRGMv2_1481_19_9
Type: TC
Location: 9594 - 10958 (-)
Gene ID: HRGMv2_1481_19_10
Type: pfam
Location: 10962 - 12020 (-)
Gene ID: HRGMv2_1481_19_11
Type: TC
Location: 12023 - 13834 (-)
Gene ID: HRGMv2_1481_19_12
Type: STP
Location: 13828 - 15660 (-)
Gene ID: HRGMv2_1481_19_13
Type: CAZyme
Location: 15917 - 17299 (-)
Gene ID: HRGMv2_1481_19_14
Type: TC
Location: 17303 - 18919 (-)
Gene ID: HRGMv2_1481_19_15
Type: pfam
Location: 19019 - 19885 (-)
Gene ID: HRGMv2_1481_19_16
Type: TC
Location: 19892 - 20404 (-)
Gene ID: HRGMv2_1481_19_17
Type: TC
Location: 20881 - 23136 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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