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Cluster: HRGMv2_1480_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1480_2 HRGMv2_1480_2_153 162916 163800 - CE7
TC HRGMv2_1480_2 HRGMv2_1480_2_154 163974 164801 - 3.A.1.5.27
TC HRGMv2_1480_2 HRGMv2_1480_2_155 164802 166817 - 3.A.1.5.25
TC HRGMv2_1480_2 HRGMv2_1480_2_156 166821 167777 - 3.A.1.5.38
TC HRGMv2_1480_2 HRGMv2_1480_2_157 167935 169548 - 3.A.1.5.27
pfam HRGMv2_1480_2 HRGMv2_1480_2_158 169914 171854 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1480_2 HRGMv2_1480_2_159 171861 174164 - 2.A.66.4.4
Gene ID: HRGMv2_1480_2_153
Type: CAZyme
Location: 162916 - 163800 (-)
Gene ID: HRGMv2_1480_2_154
Type: TC
Location: 163974 - 164801 (-)
Gene ID: HRGMv2_1480_2_155
Type: TC
Location: 164802 - 166817 (-)
Gene ID: HRGMv2_1480_2_156
Type: TC
Location: 166821 - 167777 (-)
Gene ID: HRGMv2_1480_2_157
Type: TC
Location: 167935 - 169548 (-)
Gene ID: HRGMv2_1480_2_158
Type: pfam
Location: 169914 - 171854 (-)
Gene ID: HRGMv2_1480_2_159
Type: TC
Location: 171861 - 174164 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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