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Cluster: HRGMv2_1480_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1480_2 HRGMv2_1480_2_133 139256 140989 - GH13_30
STP HRGMv2_1480_2 HRGMv2_1480_2_134 141733 142479 - STAS
STP HRGMv2_1480_2 HRGMv2_1480_2_135 142558 144903 - GAF | SpoIIE
TC HRGMv2_1480_2 HRGMv2_1480_2_136 145643 146293 - 3.A.1.5.20
TC HRGMv2_1480_2 HRGMv2_1480_2_137 146290 146670 - 3.A.1.5.36
TC HRGMv2_1480_2 HRGMv2_1480_2_138 146670 147761 - 3.A.1.5.34
TC HRGMv2_1480_2 HRGMv2_1480_2_139 147764 148699 - 3.A.1.5.11
TC HRGMv2_1480_2 HRGMv2_1480_2_140 148714 149751 - 3.A.1.5.37
TC HRGMv2_1480_2 HRGMv2_1480_2_141 149909 151585 - 3.A.1.5.35
Gene ID: HRGMv2_1480_2_133
Type: CAZyme
Location: 139256 - 140989 (-)
Gene ID: HRGMv2_1480_2_134
Type: STP
Location: 141733 - 142479 (-)
Gene ID: HRGMv2_1480_2_135
Type: STP
Location: 142558 - 144903 (-)
Gene ID: HRGMv2_1480_2_136
Type: TC
Location: 145643 - 146293 (-)
Gene ID: HRGMv2_1480_2_137
Type: TC
Location: 146290 - 146670 (-)
Gene ID: HRGMv2_1480_2_138
Type: TC
Location: 146670 - 147761 (-)
Gene ID: HRGMv2_1480_2_139
Type: TC
Location: 147764 - 148699 (-)
Gene ID: HRGMv2_1480_2_140
Type: TC
Location: 148714 - 149751 (-)
Gene ID: HRGMv2_1480_2_141
Type: TC
Location: 149909 - 151585 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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