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Cluster: HRGMv2_1480_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1480_13 HRGMv2_1480_13_50 49127 50632 + GH77
CAZyme HRGMv2_1480_13 HRGMv2_1480_13_51 50761 53028 + GT35
TC HRGMv2_1480_13 HRGMv2_1480_13_52 53485 54684 - 3.A.1.1.22
TC HRGMv2_1480_13 HRGMv2_1480_13_53 54753 55592 - 3.A.1.1.45
TC HRGMv2_1480_13 HRGMv2_1480_13_54 55592 56446 - 3.A.1.1.45
TC HRGMv2_1480_13 HRGMv2_1480_13_55 56534 57850 - 3.A.1.1.45
TF HRGMv2_1480_13 HRGMv2_1480_13_56 58157 58876 - GntR
TC HRGMv2_1480_13 HRGMv2_1480_13_57 59104 61554 + 4.A.1.1.8
Gene ID: HRGMv2_1480_13_50
Type: CAZyme
Location: 49127 - 50632 (+)
Gene ID: HRGMv2_1480_13_51
Type: CAZyme
Location: 50761 - 53028 (+)
Gene ID: HRGMv2_1480_13_52
Type: TC
Location: 53485 - 54684 (-)
Gene ID: HRGMv2_1480_13_53
Type: TC
Location: 54753 - 55592 (-)
Gene ID: HRGMv2_1480_13_54
Type: TC
Location: 55592 - 56446 (-)
Gene ID: HRGMv2_1480_13_55
Type: TC
Location: 56534 - 57850 (-)
Gene ID: HRGMv2_1480_13_56
Type: TF
Location: 58157 - 58876 (-)
Gene ID: HRGMv2_1480_13_57
Type: TC
Location: 59104 - 61554 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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