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Cluster: HRGMv2_1480_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1480_11 HRGMv2_1480_11_38 35396 36754 - 2.A.33.1.1
pfam HRGMv2_1480_11 HRGMv2_1480_11_39 37022 37945 - DHH | DHHA2
STP HRGMv2_1480_11 HRGMv2_1480_11_40 38105 39058 - Glucokinase
TC HRGMv2_1480_11 HRGMv2_1480_11_41 39299 39631 - 4.A.3.2.3
TC HRGMv2_1480_11 HRGMv2_1480_11_42 39641 39943 - 4.A.3.2.9
TC HRGMv2_1480_11 HRGMv2_1480_11_43 40105 41448 - 4.A.3.2.9
CAZyme HRGMv2_1480_11 HRGMv2_1480_11_44 41569 42969 - GH1
Gene ID: HRGMv2_1480_11_38
Type: TC
Location: 35396 - 36754 (-)
Gene ID: HRGMv2_1480_11_39
Type: pfam
Location: 37022 - 37945 (-)
Gene ID: HRGMv2_1480_11_40
Type: STP
Location: 38105 - 39058 (-)
Gene ID: HRGMv2_1480_11_41
Type: TC
Location: 39299 - 39631 (-)
Gene ID: HRGMv2_1480_11_42
Type: TC
Location: 39641 - 39943 (-)
Gene ID: HRGMv2_1480_11_43
Type: TC
Location: 40105 - 41448 (-)
Gene ID: HRGMv2_1480_11_44
Type: CAZyme
Location: 41569 - 42969 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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