dbCAN Logo

Cluster: HRGMv2_1480_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1480_11 HRGMv2_1480_11_6 4055 5224 - CE9
STP HRGMv2_1480_11 HRGMv2_1480_11_7 5342 6508 - SIS | SIS
TF HRGMv2_1480_11 HRGMv2_1480_11_8 6623 7354 - GntR
TC HRGMv2_1480_11 HRGMv2_1480_11_9 7539 8621 - 4.A.6.1.4
TC HRGMv2_1480_11 HRGMv2_1480_11_10 8611 9411 - 4.A.6.1.4
TC HRGMv2_1480_11 HRGMv2_1480_11_11 9501 9983 - 4.A.6.1.4
pfam HRGMv2_1480_11 HRGMv2_1480_11_12 10020 10301 - YajC
TC HRGMv2_1480_11 HRGMv2_1480_11_13 10301 10744 - 4.A.6.1.16
Gene ID: HRGMv2_1480_11_6
Type: CAZyme
Location: 4055 - 5224 (-)
Gene ID: HRGMv2_1480_11_7
Type: STP
Location: 5342 - 6508 (-)
Gene ID: HRGMv2_1480_11_8
Type: TF
Location: 6623 - 7354 (-)
Gene ID: HRGMv2_1480_11_9
Type: TC
Location: 7539 - 8621 (-)
Gene ID: HRGMv2_1480_11_10
Type: TC
Location: 8611 - 9411 (-)
Gene ID: HRGMv2_1480_11_11
Type: TC
Location: 9501 - 9983 (-)
Gene ID: HRGMv2_1480_11_12
Type: pfam
Location: 10020 - 10301 (-)
Gene ID: HRGMv2_1480_11_13
Type: TC
Location: 10301 - 10744 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List