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Cluster: HRGMv2_1478_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1478_7 HRGMv2_1478_7_10 10500 11573 - GT4
pfam HRGMv2_1478_7 HRGMv2_1478_7_11 11631 12719 - EpsG
CAZyme HRGMv2_1478_7 HRGMv2_1478_7_12 12720 13781 - GT4
pfam HRGMv2_1478_7 HRGMv2_1478_7_13 13843 14925 - Glycos_transf_1 | Glyco_trans_1_4
CAZyme HRGMv2_1478_7 HRGMv2_1478_7_14 14945 15697 - GT2
TC HRGMv2_1478_7 HRGMv2_1478_7_15 15698 16303 - 9.B.18.1.3
STP HRGMv2_1478_7 HRGMv2_1478_7_16 16390 17607 - Aminotran_1_2
TC HRGMv2_1478_7 HRGMv2_1478_7_17 17625 19505 - 9.B.18.2.1
Gene ID: HRGMv2_1478_7_10
Type: CAZyme
Location: 10500 - 11573 (-)
Gene ID: HRGMv2_1478_7_11
Type: pfam
Location: 11631 - 12719 (-)
Gene ID: HRGMv2_1478_7_12
Type: CAZyme
Location: 12720 - 13781 (-)
Gene ID: HRGMv2_1478_7_13
Type: pfam
Location: 13843 - 14925 (-)
Gene ID: HRGMv2_1478_7_14
Type: CAZyme
Location: 14945 - 15697 (-)
Gene ID: HRGMv2_1478_7_15
Type: TC
Location: 15698 - 16303 (-)
Gene ID: HRGMv2_1478_7_16
Type: STP
Location: 16390 - 17607 (-)
Gene ID: HRGMv2_1478_7_17
Type: TC
Location: 17625 - 19505 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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