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Cluster: HRGMv2_1477_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1477_19 HRGMv2_1477_19_3 1191 2117 - CE7
TC HRGMv2_1477_19 HRGMv2_1477_19_4 2249 3076 - 3.A.1.5.27
TC HRGMv2_1477_19 HRGMv2_1477_19_5 3077 5092 - 3.A.1.5.25
TC HRGMv2_1477_19 HRGMv2_1477_19_6 5096 6052 - 3.A.1.5.38
TC HRGMv2_1477_19 HRGMv2_1477_19_7 6210 7823 - 3.A.1.5.27
pfam HRGMv2_1477_19 HRGMv2_1477_19_8 8189 10129 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1477_19 HRGMv2_1477_19_9 10136 11818 - 2.A.66.4.4
Gene ID: HRGMv2_1477_19_3
Type: CAZyme
Location: 1191 - 2117 (-)
Gene ID: HRGMv2_1477_19_4
Type: TC
Location: 2249 - 3076 (-)
Gene ID: HRGMv2_1477_19_5
Type: TC
Location: 3077 - 5092 (-)
Gene ID: HRGMv2_1477_19_6
Type: TC
Location: 5096 - 6052 (-)
Gene ID: HRGMv2_1477_19_7
Type: TC
Location: 6210 - 7823 (-)
Gene ID: HRGMv2_1477_19_8
Type: pfam
Location: 8189 - 10129 (-)
Gene ID: HRGMv2_1477_19_9
Type: TC
Location: 10136 - 11818 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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