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Cluster: HRGMv2_1476_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1476_23 HRGMv2_1476_23_11 15286 17736 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1476_23 HRGMv2_1476_23_12 17758 17877 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1476_23 HRGMv2_1476_23_13 17961 18680 + GntR
TC HRGMv2_1476_23 HRGMv2_1476_23_14 18987 20303 + 3.A.1.1.45
TC HRGMv2_1476_23 HRGMv2_1476_23_15 20391 21245 + 3.A.1.1.45
TC HRGMv2_1476_23 HRGMv2_1476_23_16 21245 22084 + 3.A.1.1.45
TC HRGMv2_1476_23 HRGMv2_1476_23_17 22153 23352 + 3.A.1.1.22
CAZyme HRGMv2_1476_23 HRGMv2_1476_23_18 23808 26075 - GT35
CAZyme HRGMv2_1476_23 HRGMv2_1476_23_19 26205 27710 - GH77
Gene ID: HRGMv2_1476_23_11
Type: TC
Location: 15286 - 17736 (-)
Gene ID: HRGMv2_1476_23_12
Type:
Location: 17758 - 17877 (+)
Gene ID: HRGMv2_1476_23_13
Type: TF
Location: 17961 - 18680 (+)
Gene ID: HRGMv2_1476_23_14
Type: TC
Location: 18987 - 20303 (+)
Gene ID: HRGMv2_1476_23_15
Type: TC
Location: 20391 - 21245 (+)
Gene ID: HRGMv2_1476_23_16
Type: TC
Location: 21245 - 22084 (+)
Gene ID: HRGMv2_1476_23_17
Type: TC
Location: 22153 - 23352 (+)
Gene ID: HRGMv2_1476_23_18
Type: CAZyme
Location: 23808 - 26075 (-)
Gene ID: HRGMv2_1476_23_19
Type: CAZyme
Location: 26205 - 27710 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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