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Cluster: HRGMv2_1476_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1476_6 HRGMv2_1476_6_25 27703 28041 - 4.A.3.1.2
TF HRGMv2_1476_6 HRGMv2_1476_6_26 28256 29260 - LacI
TC HRGMv2_1476_6 HRGMv2_1476_6_27 29618 31393 + 4.A.3.1.1
CAZyme HRGMv2_1476_6 HRGMv2_1476_6_28 31460 32899 + GH1
TF HRGMv2_1476_6 HRGMv2_1476_6_29 33167 34204 - LacI
CAZyme HRGMv2_1476_6 HRGMv2_1476_6_30 34546 35988 + GH1
TC HRGMv2_1476_6 HRGMv2_1476_6_31 36165 37925 + 4.A.3.1.1
TF HRGMv2_1476_6 HRGMv2_1476_6_32 38183 39193 - LacI
TC HRGMv2_1476_6 HRGMv2_1476_6_33 39469 41247 + 4.A.3.1.1
CAZyme HRGMv2_1476_6 HRGMv2_1476_6_34 41324 42745 + GH1
Gene ID: HRGMv2_1476_6_25
Type: TC
Location: 27703 - 28041 (-)
Gene ID: HRGMv2_1476_6_26
Type: TF
Location: 28256 - 29260 (-)
Gene ID: HRGMv2_1476_6_27
Type: TC
Location: 29618 - 31393 (+)
Gene ID: HRGMv2_1476_6_28
Type: CAZyme
Location: 31460 - 32899 (+)
Gene ID: HRGMv2_1476_6_29
Type: TF
Location: 33167 - 34204 (-)
Gene ID: HRGMv2_1476_6_30
Type: CAZyme
Location: 34546 - 35988 (+)
Gene ID: HRGMv2_1476_6_31
Type: TC
Location: 36165 - 37925 (+)
Gene ID: HRGMv2_1476_6_32
Type: TF
Location: 38183 - 39193 (-)
Gene ID: HRGMv2_1476_6_33
Type: TC
Location: 39469 - 41247 (+)
Gene ID: HRGMv2_1476_6_34
Type: CAZyme
Location: 41324 - 42745 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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