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Cluster: HRGMv2_1476_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1476_5 HRGMv2_1476_5_117 121842 122828 - 9.B.97.6.3
TC HRGMv2_1476_5 HRGMv2_1476_5_118 123035 123802 - 3.A.1.103.1
TC HRGMv2_1476_5 HRGMv2_1476_5_119 123814 124659 - 3.A.1.103.6
CAZyme HRGMv2_1476_5 HRGMv2_1476_5_120 124820 125782 + GT81
CAZyme HRGMv2_1476_5 HRGMv2_1476_5_121 125788 126756 + GT2
TC HRGMv2_1476_5 HRGMv2_1476_5_122 126740 129148 + 9.B.144.1.5
Gene ID: HRGMv2_1476_5_117
Type: TC
Location: 121842 - 122828 (-)
Gene ID: HRGMv2_1476_5_118
Type: TC
Location: 123035 - 123802 (-)
Gene ID: HRGMv2_1476_5_119
Type: TC
Location: 123814 - 124659 (-)
Gene ID: HRGMv2_1476_5_120
Type: CAZyme
Location: 124820 - 125782 (+)
Gene ID: HRGMv2_1476_5_121
Type: CAZyme
Location: 125788 - 126756 (+)
Gene ID: HRGMv2_1476_5_122
Type: TC
Location: 126740 - 129148 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1476_5_121 vegan > omnivore 1.05964 0.00566

🧭 Explore Read Mapping of CGC

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