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Cluster: HRGMv2_1472_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1472_21 HRGMv2_1472_21_10 10764 11102 - 4.A.3.1.2
TF HRGMv2_1472_21 HRGMv2_1472_21_11 11317 12321 - LacI
TC HRGMv2_1472_21 HRGMv2_1472_21_12 12679 14448 + 4.A.3.1.1
CAZyme HRGMv2_1472_21 HRGMv2_1472_21_13 14515 15954 + GH1
TF HRGMv2_1472_21 HRGMv2_1472_21_14 16311 17321 - LacI
TC HRGMv2_1472_21 HRGMv2_1472_21_15 17597 19375 + 4.A.3.1.1
CAZyme HRGMv2_1472_21 HRGMv2_1472_21_16 19451 20872 + GH1
Gene ID: HRGMv2_1472_21_10
Type: TC
Location: 10764 - 11102 (-)
Gene ID: HRGMv2_1472_21_11
Type: TF
Location: 11317 - 12321 (-)
Gene ID: HRGMv2_1472_21_12
Type: TC
Location: 12679 - 14448 (+)
Gene ID: HRGMv2_1472_21_13
Type: CAZyme
Location: 14515 - 15954 (+)
Gene ID: HRGMv2_1472_21_14
Type: TF
Location: 16311 - 17321 (-)
Gene ID: HRGMv2_1472_21_15
Type: TC
Location: 17597 - 19375 (+)
Gene ID: HRGMv2_1472_21_16
Type: CAZyme
Location: 19451 - 20872 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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