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Cluster: HRGMv2_1472_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1472_37 HRGMv2_1472_37_108 115838 117343 + GH77
CAZyme HRGMv2_1472_37 HRGMv2_1472_37_109 117472 119739 + GT35
TC HRGMv2_1472_37 HRGMv2_1472_37_110 120275 121474 - 3.A.1.1.22
TC HRGMv2_1472_37 HRGMv2_1472_37_111 121543 122382 - 3.A.1.1.45
TC HRGMv2_1472_37 HRGMv2_1472_37_112 122382 123236 - 3.A.1.1.45
TC HRGMv2_1472_37 HRGMv2_1472_37_113 123324 124640 - 3.A.1.1.45
TF HRGMv2_1472_37 HRGMv2_1472_37_114 124947 125666 - GntR
NULL(UNKNOWN) HRGMv2_1472_37 HRGMv2_1472_37_115 125750 125869 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1472_37 HRGMv2_1472_37_116 125891 128341 + 4.A.1.1.8
Gene ID: HRGMv2_1472_37_108
Type: CAZyme
Location: 115838 - 117343 (+)
Gene ID: HRGMv2_1472_37_109
Type: CAZyme
Location: 117472 - 119739 (+)
Gene ID: HRGMv2_1472_37_110
Type: TC
Location: 120275 - 121474 (-)
Gene ID: HRGMv2_1472_37_111
Type: TC
Location: 121543 - 122382 (-)
Gene ID: HRGMv2_1472_37_112
Type: TC
Location: 122382 - 123236 (-)
Gene ID: HRGMv2_1472_37_113
Type: TC
Location: 123324 - 124640 (-)
Gene ID: HRGMv2_1472_37_114
Type: TF
Location: 124947 - 125666 (-)
Gene ID: HRGMv2_1472_37_115
Type:
Location: 125750 - 125869 (-)
Gene ID: HRGMv2_1472_37_116
Type: TC
Location: 125891 - 128341 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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