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Cluster: HRGMv2_1472_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1472_37 HRGMv2_1472_37_12 10380 11738 - 2.A.33.1.1
pfam HRGMv2_1472_37 HRGMv2_1472_37_13 12006 12929 - DHH | DHHA2
STP HRGMv2_1472_37 HRGMv2_1472_37_14 13096 14049 - Glucokinase
TC HRGMv2_1472_37 HRGMv2_1472_37_15 14291 14623 - 4.A.3.2.3
TC HRGMv2_1472_37 HRGMv2_1472_37_16 14633 14935 - 4.A.3.2.9
TC HRGMv2_1472_37 HRGMv2_1472_37_17 15089 16441 - 4.A.3.2.2
CAZyme HRGMv2_1472_37 HRGMv2_1472_37_18 16562 17962 - GH1
Gene ID: HRGMv2_1472_37_12
Type: TC
Location: 10380 - 11738 (-)
Gene ID: HRGMv2_1472_37_13
Type: pfam
Location: 12006 - 12929 (-)
Gene ID: HRGMv2_1472_37_14
Type: STP
Location: 13096 - 14049 (-)
Gene ID: HRGMv2_1472_37_15
Type: TC
Location: 14291 - 14623 (-)
Gene ID: HRGMv2_1472_37_16
Type: TC
Location: 14633 - 14935 (-)
Gene ID: HRGMv2_1472_37_17
Type: TC
Location: 15089 - 16441 (-)
Gene ID: HRGMv2_1472_37_18
Type: CAZyme
Location: 16562 - 17962 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1472_37_16 vegan > omnivore 1.00073 0.00701

🧭 Explore Read Mapping of CGC

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