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Cluster: HRGMv2_1472_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1472_33 HRGMv2_1472_33_12 11168 12094 - CE7
TC HRGMv2_1472_33 HRGMv2_1472_33_13 12226 13053 - 3.A.1.5.27
TC HRGMv2_1472_33 HRGMv2_1472_33_14 13054 15069 - 3.A.1.5.25
TC HRGMv2_1472_33 HRGMv2_1472_33_15 15073 16029 - 3.A.1.5.38
TC HRGMv2_1472_33 HRGMv2_1472_33_16 16187 17800 - 3.A.1.5.27
pfam HRGMv2_1472_33 HRGMv2_1472_33_17 18166 20106 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1472_33 HRGMv2_1472_33_18 20113 21795 - 2.A.66.4.4
Gene ID: HRGMv2_1472_33_12
Type: CAZyme
Location: 11168 - 12094 (-)
Gene ID: HRGMv2_1472_33_13
Type: TC
Location: 12226 - 13053 (-)
Gene ID: HRGMv2_1472_33_14
Type: TC
Location: 13054 - 15069 (-)
Gene ID: HRGMv2_1472_33_15
Type: TC
Location: 15073 - 16029 (-)
Gene ID: HRGMv2_1472_33_16
Type: TC
Location: 16187 - 17800 (-)
Gene ID: HRGMv2_1472_33_17
Type: pfam
Location: 18166 - 20106 (-)
Gene ID: HRGMv2_1472_33_18
Type: TC
Location: 20113 - 21795 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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