dbCAN Logo

Cluster: HRGMv2_1472_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1472_6 HRGMv2_1472_6_14 21591 22307 - 9.B.143.2.3
pfam HRGMv2_1472_6 HRGMv2_1472_6_15 22576 24726 + Radical_SAM_N | DUF3362
peptidase HRGMv2_1472_6 HRGMv2_1472_6_16 24723 25643 - G05.UPW
CAZyme HRGMv2_1472_6 HRGMv2_1472_6_17 25837 27219 - GH4
TC HRGMv2_1472_6 HRGMv2_1472_6_18 27223 28839 - 4.A.1.1.3
pfam HRGMv2_1472_6 HRGMv2_1472_6_19 28939 29793 - PRD | PRD | CAT_RBD
TC HRGMv2_1472_6 HRGMv2_1472_6_20 29812 30324 - 4.A.1.2.5
STP HRGMv2_1472_6 HRGMv2_1472_6_21 30619 31380 - Fer4
TC HRGMv2_1472_6 HRGMv2_1472_6_22 32000 34198 - 1.I.1.1.3
STP HRGMv2_1472_6 HRGMv2_1472_6_23 34779 35741 + FHA
STP HRGMv2_1472_6 HRGMv2_1472_6_24 35913 37997 + Pkinase
TC HRGMv2_1472_6 HRGMv2_1472_6_25 38491 40833 + 3.A.3.5.15
Gene ID: HRGMv2_1472_6_14
Type: TC
Location: 21591 - 22307 (-)
Gene ID: HRGMv2_1472_6_15
Type: pfam
Location: 22576 - 24726 (+)
Gene ID: HRGMv2_1472_6_16
Type: peptidase
Location: 24723 - 25643 (-)
Gene ID: HRGMv2_1472_6_17
Type: CAZyme
Location: 25837 - 27219 (-)
Gene ID: HRGMv2_1472_6_18
Type: TC
Location: 27223 - 28839 (-)
Gene ID: HRGMv2_1472_6_19
Type: pfam
Location: 28939 - 29793 (-)
Gene ID: HRGMv2_1472_6_20
Type: TC
Location: 29812 - 30324 (-)
Gene ID: HRGMv2_1472_6_21
Type: STP
Location: 30619 - 31380 (-)
Gene ID: HRGMv2_1472_6_22
Type: TC
Location: 32000 - 34198 (-)
Gene ID: HRGMv2_1472_6_23
Type: STP
Location: 34779 - 35741 (+)
Gene ID: HRGMv2_1472_6_24
Type: STP
Location: 35913 - 37997 (+)
Gene ID: HRGMv2_1472_6_25
Type: TC
Location: 38491 - 40833 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List