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Cluster: HRGMv2_1471_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1471_9 HRGMv2_1471_9_15 13697 14032 + 4.A.3.2.7
TC HRGMv2_1471_9 HRGMv2_1471_9_16 14104 14400 + 4.A.3.2.2
TC HRGMv2_1471_9 HRGMv2_1471_9_17 14435 15739 + 4.A.3.2.8
CAZyme HRGMv2_1471_9 HRGMv2_1471_9_18 15845 17305 + GH1
CAZyme HRGMv2_1471_9 HRGMv2_1471_9_19 17298 18404 + GH170
pfam HRGMv2_1471_9 HRGMv2_1471_9_20 18469 19194 - TatD_DNase
NULL(UNKNOWN) HRGMv2_1471_9 HRGMv2_1471_9_21 19210 19518 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1471_9 HRGMv2_1471_9_22 19519 21261 + 3.A.1.21.1
Gene ID: HRGMv2_1471_9_15
Type: TC
Location: 13697 - 14032 (+)
Gene ID: HRGMv2_1471_9_16
Type: TC
Location: 14104 - 14400 (+)
Gene ID: HRGMv2_1471_9_17
Type: TC
Location: 14435 - 15739 (+)
Gene ID: HRGMv2_1471_9_18
Type: CAZyme
Location: 15845 - 17305 (+)
Gene ID: HRGMv2_1471_9_19
Type: CAZyme
Location: 17298 - 18404 (+)
Gene ID: HRGMv2_1471_9_20
Type: pfam
Location: 18469 - 19194 (-)
Gene ID: HRGMv2_1471_9_21
Type:
Location: 19210 - 19518 (+)
Gene ID: HRGMv2_1471_9_22
Type: TC
Location: 19519 - 21261 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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