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Cluster: HRGMv2_1471_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1471_22 HRGMv2_1471_22_111 108992 109474 + 4.A.6.1.5
sulfatase HRGMv2_1471_22 HRGMv2_1471_22_112 109802 110854 - S1_4
TF HRGMv2_1471_22 HRGMv2_1471_22_113 111061 111825 + HTH_DeoR
CAZyme HRGMv2_1471_22 HRGMv2_1471_22_114 112020 113441 - GH1
TC HRGMv2_1471_22 HRGMv2_1471_22_115 113518 115296 - 4.A.3.1.1
TF HRGMv2_1471_22 HRGMv2_1471_22_116 115582 116583 + LacI
TC HRGMv2_1471_22 HRGMv2_1471_22_117 116757 118517 - 4.A.3.1.1
CAZyme HRGMv2_1471_22 HRGMv2_1471_22_118 118693 120135 - GH1
TF HRGMv2_1471_22 HRGMv2_1471_22_119 120477 121514 + LacI
CAZyme HRGMv2_1471_22 HRGMv2_1471_22_120 121782 123221 - GH1
TC HRGMv2_1471_22 HRGMv2_1471_22_121 123288 125063 - 4.A.3.1.1
TF HRGMv2_1471_22 HRGMv2_1471_22_122 125421 126425 + LacI
TC HRGMv2_1471_22 HRGMv2_1471_22_123 126640 126978 + 4.A.3.1.2
Gene ID: HRGMv2_1471_22_111
Type: TC
Location: 108992 - 109474 (+)
Gene ID: HRGMv2_1471_22_112
Type: sulfatase
Location: 109802 - 110854 (-)
Gene ID: HRGMv2_1471_22_113
Type: TF
Location: 111061 - 111825 (+)
Gene ID: HRGMv2_1471_22_114
Type: CAZyme
Location: 112020 - 113441 (-)
Gene ID: HRGMv2_1471_22_115
Type: TC
Location: 113518 - 115296 (-)
Gene ID: HRGMv2_1471_22_116
Type: TF
Location: 115582 - 116583 (+)
Gene ID: HRGMv2_1471_22_117
Type: TC
Location: 116757 - 118517 (-)
Gene ID: HRGMv2_1471_22_118
Type: CAZyme
Location: 118693 - 120135 (-)
Gene ID: HRGMv2_1471_22_119
Type: TF
Location: 120477 - 121514 (+)
Gene ID: HRGMv2_1471_22_120
Type: CAZyme
Location: 121782 - 123221 (-)
Gene ID: HRGMv2_1471_22_121
Type: TC
Location: 123288 - 125063 (-)
Gene ID: HRGMv2_1471_22_122
Type: TF
Location: 125421 - 126425 (+)
Gene ID: HRGMv2_1471_22_123
Type: TC
Location: 126640 - 126978 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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