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Cluster: HRGMv2_1471_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1471_22 HRGMv2_1471_22_50 50340 51740 + GH1
TC HRGMv2_1471_22 HRGMv2_1471_22_51 51861 53213 + 4.A.3.2.2
TC HRGMv2_1471_22 HRGMv2_1471_22_52 53367 53669 + 4.A.3.2.9
TC HRGMv2_1471_22 HRGMv2_1471_22_53 53679 54011 + 4.A.3.2.3
STP HRGMv2_1471_22 HRGMv2_1471_22_54 54251 55204 + Glucokinase
pfam HRGMv2_1471_22 HRGMv2_1471_22_55 55361 56284 + DHH | DHHA2
TC HRGMv2_1471_22 HRGMv2_1471_22_56 56552 57910 + 2.A.33.1.1
Gene ID: HRGMv2_1471_22_50
Type: CAZyme
Location: 50340 - 51740 (+)
Gene ID: HRGMv2_1471_22_51
Type: TC
Location: 51861 - 53213 (+)
Gene ID: HRGMv2_1471_22_52
Type: TC
Location: 53367 - 53669 (+)
Gene ID: HRGMv2_1471_22_53
Type: TC
Location: 53679 - 54011 (+)
Gene ID: HRGMv2_1471_22_54
Type: STP
Location: 54251 - 55204 (+)
Gene ID: HRGMv2_1471_22_55
Type: pfam
Location: 55361 - 56284 (+)
Gene ID: HRGMv2_1471_22_56
Type: TC
Location: 56552 - 57910 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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