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Cluster: HRGMv2_1471_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1471_18 HRGMv2_1471_18_13 12104 13609 + GH77
CAZyme HRGMv2_1471_18 HRGMv2_1471_18_14 13737 16004 + GT35
TC HRGMv2_1471_18 HRGMv2_1471_18_15 16460 17659 - 3.A.1.1.22
TC HRGMv2_1471_18 HRGMv2_1471_18_16 17728 18567 - 3.A.1.1.45
TC HRGMv2_1471_18 HRGMv2_1471_18_17 18567 19421 - 3.A.1.1.45
TC HRGMv2_1471_18 HRGMv2_1471_18_18 19509 20825 - 3.A.1.1.45
TF HRGMv2_1471_18 HRGMv2_1471_18_19 21132 21851 - GntR
NULL(UNKNOWN) HRGMv2_1471_18 HRGMv2_1471_18_20 21935 22054 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1471_18 HRGMv2_1471_18_21 22076 24526 + 4.A.1.1.8
Gene ID: HRGMv2_1471_18_13
Type: CAZyme
Location: 12104 - 13609 (+)
Gene ID: HRGMv2_1471_18_14
Type: CAZyme
Location: 13737 - 16004 (+)
Gene ID: HRGMv2_1471_18_15
Type: TC
Location: 16460 - 17659 (-)
Gene ID: HRGMv2_1471_18_16
Type: TC
Location: 17728 - 18567 (-)
Gene ID: HRGMv2_1471_18_17
Type: TC
Location: 18567 - 19421 (-)
Gene ID: HRGMv2_1471_18_18
Type: TC
Location: 19509 - 20825 (-)
Gene ID: HRGMv2_1471_18_19
Type: TF
Location: 21132 - 21851 (-)
Gene ID: HRGMv2_1471_18_20
Type:
Location: 21935 - 22054 (-)
Gene ID: HRGMv2_1471_18_21
Type: TC
Location: 22076 - 24526 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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