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Cluster: HRGMv2_1471_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1471_12 HRGMv2_1471_12_268 318776 321187 - 9.B.144.1.5
CAZyme HRGMv2_1471_12 HRGMv2_1471_12_269 321171 322139 - GT2
CAZyme HRGMv2_1471_12 HRGMv2_1471_12_270 322146 323117 - GT81
TC HRGMv2_1471_12 HRGMv2_1471_12_271 323278 324123 + 3.A.1.103.6
TC HRGMv2_1471_12 HRGMv2_1471_12_272 324135 324902 + 3.A.1.103.1
TC HRGMv2_1471_12 HRGMv2_1471_12_273 325107 325361 + 9.B.97.6.3
Gene ID: HRGMv2_1471_12_268
Type: TC
Location: 318776 - 321187 (-)
Gene ID: HRGMv2_1471_12_269
Type: CAZyme
Location: 321171 - 322139 (-)
Gene ID: HRGMv2_1471_12_270
Type: CAZyme
Location: 322146 - 323117 (-)
Gene ID: HRGMv2_1471_12_271
Type: TC
Location: 323278 - 324123 (+)
Gene ID: HRGMv2_1471_12_272
Type: TC
Location: 324135 - 324902 (+)
Gene ID: HRGMv2_1471_12_273
Type: TC
Location: 325107 - 325361 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1471_12_269 vegan > omnivore 1.05500 0.00566

🧭 Explore Read Mapping of CGC

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