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Cluster: HRGMv2_1471_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1471_12 HRGMv2_1471_12_97 105537 107798 + 1.I.1.1.3
STP HRGMv2_1471_12 HRGMv2_1471_12_98 108420 109181 + Fer4
TC HRGMv2_1471_12 HRGMv2_1471_12_99 109476 109988 + 4.A.1.2.5
pfam HRGMv2_1471_12 HRGMv2_1471_12_100 109995 110861 + PRD | PRD | CAT_RBD
TC HRGMv2_1471_12 HRGMv2_1471_12_101 110961 112577 + 4.A.1.1.3
CAZyme HRGMv2_1471_12 HRGMv2_1471_12_102 112581 113963 + GH4
Gene ID: HRGMv2_1471_12_97
Type: TC
Location: 105537 - 107798 (+)
Gene ID: HRGMv2_1471_12_98
Type: STP
Location: 108420 - 109181 (+)
Gene ID: HRGMv2_1471_12_99
Type: TC
Location: 109476 - 109988 (+)
Gene ID: HRGMv2_1471_12_100
Type: pfam
Location: 109995 - 110861 (+)
Gene ID: HRGMv2_1471_12_101
Type: TC
Location: 110961 - 112577 (+)
Gene ID: HRGMv2_1471_12_102
Type: CAZyme
Location: 112581 - 113963 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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